Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC087269.2-201ENST00000641764 975 ntBASIC6.61□□□□□ -1.35
MMP3P08254 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
MMP3P08254 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
MMP3P08254 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.61□□□□□ -1.35
MMP3P08254 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
MMP3P08254 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
MMP3P08254 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
MMP3P08254 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.6□□□□□ -1.35
MMP3P08254 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 RNA5SP132-201ENST00000364725 118 ntBASIC6.6□□□□□ -1.35
MMP3P08254 RNA5SP211-201ENST00000365516 117 ntBASIC6.6□□□□□ -1.35
MMP3P08254 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 OR2AT2P-201ENST00000413438 905 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.6□□□□□ -1.35
MMP3P08254 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.6□□□□□ -1.35
MMP3P08254 AL662874.1-201ENST00000426065 230 ntBASIC6.6□□□□□ -1.35
MMP3P08254 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.6□□□□□ -1.35
MMP3P08254 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.6□□□□□ -1.35
MMP3P08254 RPS17P15-201ENST00000475609 349 ntBASIC6.6□□□□□ -1.35
MMP3P08254 RPL23AP40-201ENST00000487630 390 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.6□□□□□ -1.35
MMP3P08254 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.6□□□□□ -1.35
MMP3P08254 IGKV2-19-201ENST00000518132 283 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.6□□□□□ -1.35
MMP3P08254 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 TXNP4-201ENST00000575018 310 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.6□□□□□ -1.35
MMP3P08254 FO393422.1-201ENST00000603908 708 ntBASIC6.6□□□□□ -1.35
MMP3P08254 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.6□□□□□ -1.35
MMP3P08254 AC091193.1-201ENST00000604640 448 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AL139099.4-201ENST00000614802 114 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AC022919.1-201ENST00000624979 626 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.6□□□□□ -1.35
MMP3P08254 AC107980.1-201ENST00000558671 3355 ntBASIC6.6□□□□□ -1.35
MMP3P08254 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
MMP3P08254 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.6□□□□□ -1.35
MMP3P08254 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
MMP3P08254 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 AL662795.2-201ENST00000624252 3706 ntBASIC6.6□□□□□ -1.35
MMP3P08254 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
MMP3P08254 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.59□□□□□ -1.35
MMP3P08254 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 ABCA11P-202ENST00000504019 2110 ntBASIC6.59□□□□□ -1.35
MMP3P08254 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 AC027279.4-201ENST00000624371 2072 ntBASIC6.59□□□□□ -1.35
MMP3P08254 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.59□□□□□ -1.35
MMP3P08254 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
MMP3P08254 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
MMP3P08254 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.59□□□□□ -1.35
MMP3P08254 EEF1B2P6-201ENST00000445713 673 ntBASIC6.59□□□□□ -1.35
MMP3P08254 LRRC37A14P-201ENST00000452297 462 ntBASIC6.59□□□□□ -1.35
MMP3P08254 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.59□□□□□ -1.35
MMP3P08254 AL022319.1-201ENST00000458183 1167 ntBASIC6.59□□□□□ -1.35
MMP3P08254 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.59□□□□□ -1.35
MMP3P08254 MTND3P6-201ENST00000485242 339 ntBASIC6.59□□□□□ -1.35
MMP3P08254 CCDC11P1-201ENST00000503137 1162 ntBASIC6.59□□□□□ -1.35
MMP3P08254 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.59□□□□□ -1.35
MMP3P08254 AC109481.1-201ENST00000509173 282 ntBASIC6.59□□□□□ -1.35
MMP3P08254 AC002456.2-201ENST00000509356 380 ntBASIC6.59□□□□□ -1.35
MMP3P08254 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.59□□□□□ -1.35
MMP3P08254 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.59□□□□□ -1.35
MMP3P08254 OR4A40P-201ENST00000533878 948 ntBASIC6.59□□□□□ -1.35
MMP3P08254 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 AC067852.5-201ENST00000589299 310 ntBASIC6.59□□□□□ -1.35
MMP3P08254 AC145423.1-201ENST00000605712 336 ntBASIC6.59□□□□□ -1.35
MMP3P08254 AP000864.1-201ENST00000609424 650 ntBASIC6.59□□□□□ -1.35
MMP3P08254 PCA3_2.1-201ENST00000612507 409 ntBASIC6.59□□□□□ -1.35
MMP3P08254 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
MMP3P08254 AL691477.1-201ENST00000624398 162 ntBASIC6.59□□□□□ -1.35
MMP3P08254 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
MMP3P08254 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MMP3P08254 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
MMP3P08254 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
MMP3P08254 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms