Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.45□□□□□ -1.54
SPTA1P02549 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.45□□□□□ -1.54
SPTA1P02549 AP000919.1-201ENST00000582850 985 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 GTF2IP6-201ENST00000583143 541 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.45□□□□□ -1.54
SPTA1P02549 AC068831.8-201ENST00000620171 435 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 MAPK10-350ENST00000641777 965 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SPTA1P02549 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
SPTA1P02549 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 SAMM50P1-201ENST00000455403 1399 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
SPTA1P02549 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SPTA1P02549 GAPDHP23-201ENST00000444823 993 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 OR7E116P-201ENST00000448529 957 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 AC023245.1-201ENST00000468501 517 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.45□□□□□ -1.54
SPTA1P02549 HAUS8P1-201ENST00000549005 542 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 AC034229.6-201ENST00000623704 224 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 AL132640.3-201ENST00000630473 177 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 IQCB2P-201ENST00000401788 1633 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.45□□□□□ -1.54
SPTA1P02549 AC020658.2-201ENST00000559030 4020 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 AC007485.2-201ENST00000623493 1667 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SPTA1P02549 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.44□□□□□ -1.54
SPTA1P02549 AL445466.1-201ENST00000448432 357 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 RN7SL870P-201ENST00000460111 296 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 AC006463.2-201ENST00000473326 348 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 RN7SL97P-201ENST00000486780 299 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 OR8G3P-201ENST00000533406 921 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.44□□□□□ -1.54
SPTA1P02549 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.44□□□□□ -1.54
SPTA1P02549 AC234771.5-201ENST00000600161 514 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC5.44□□□□□ -1.54
SPTA1P02549 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SPTA1P02549 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 AL050335.1-201ENST00000396909 869 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 AL390119.1-201ENST00000440329 312 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.44□□□□□ -1.54
SPTA1P02549 RN7SL738P-201ENST00000470264 297 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 AC079841.1-201ENST00000481228 950 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.44□□□□□ -1.54
SPTA1P02549 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.44□□□□□ -1.54
SPTA1P02549 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.44□□□□□ -1.54
SPTA1P02549 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.44□□□□□ -1.54
SPTA1P02549 AC083809.1-201ENST00000615051 472 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 AC136428.4-201ENST00000634254 1155 ntBASIC5.44□□□□□ -1.54
SPTA1P02549 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SPTA1P02549 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.44□□□□□ -1.54
SPTA1P02549 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SPTA1P02549 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.43□□□□□ -1.54
SPTA1P02549 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.43□□□□□ -1.54
SPTA1P02549 AP002364.1-201ENST00000623330 3386 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 RPS2P45-201ENST00000469997 2057 ntBASIC5.43□□□□□ -1.54
SPTA1P02549 OR13C1P-202ENST00000641378 2919 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms