RNA–Protein interactions for RNA: ENST00000616060.1

Metazoa_SRP.170-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 254 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.170-201ENST00000616060 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
Metazoa_SRP.170-201ENST00000616060 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
Metazoa_SRP.170-201ENST00000616060 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
Metazoa_SRP.170-201ENST00000616060 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
Metazoa_SRP.170-201ENST00000616060 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
Metazoa_SRP.170-201ENST00000616060 FOXD1Q16676 465 aa21.93■■□□□ 1.1
Metazoa_SRP.170-201ENST00000616060 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
Metazoa_SRP.170-201ENST00000616060 ADRA2BP18089 450 aa21.02■□□□□ 0.96
Metazoa_SRP.170-201ENST00000616060 PIAS4Q8N2W9 510 aaPredicted RBP20.66■□□□□ 0.9
Metazoa_SRP.170-201ENST00000616060 MSH5O43196 834 aa20.27■□□□□ 0.84
Metazoa_SRP.170-201ENST00000616060 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
Metazoa_SRP.170-201ENST00000616060 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
Metazoa_SRP.170-201ENST00000616060 MAPK8IP2Q13387 824 aaPredicted RBP19.06■□□□□ 0.64
Metazoa_SRP.170-201ENST00000616060 KCNA4P22459 653 aa18.94■□□□□ 0.62
Metazoa_SRP.170-201ENST00000616060 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
Metazoa_SRP.170-201ENST00000616060 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
Metazoa_SRP.170-201ENST00000616060 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
Metazoa_SRP.170-201ENST00000616060 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
Metazoa_SRP.170-201ENST00000616060 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
Metazoa_SRP.170-201ENST00000616060 HOXD11P31277 338 aaPredicted RBP18.5■□□□□ 0.55
Metazoa_SRP.170-201ENST00000616060 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
Metazoa_SRP.170-201ENST00000616060 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
Metazoa_SRP.170-201ENST00000616060 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
Metazoa_SRP.170-201ENST00000616060 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
Metazoa_SRP.170-201ENST00000616060 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
Metazoa_SRP.170-201ENST00000616060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
Metazoa_SRP.170-201ENST00000616060 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
Metazoa_SRP.170-201ENST00000616060 ZBTB22O15209 634 aa17.46■□□□□ 0.39
Metazoa_SRP.170-201ENST00000616060 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
Metazoa_SRP.170-201ENST00000616060 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
Metazoa_SRP.170-201ENST00000616060 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
Metazoa_SRP.170-201ENST00000616060 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
Metazoa_SRP.170-201ENST00000616060 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
Metazoa_SRP.170-201ENST00000616060 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
Metazoa_SRP.170-201ENST00000616060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
Metazoa_SRP.170-201ENST00000616060 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
Metazoa_SRP.170-201ENST00000616060 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
Metazoa_SRP.170-201ENST00000616060 APLP2Q06481 763 aa16.92■□□□□ 0.3
Metazoa_SRP.170-201ENST00000616060 ATXN8OSP0DMR3 200 aa16.89■□□□□ 0.29
Metazoa_SRP.170-201ENST00000616060 CACNB1Q02641 598 aaPredicted RBP16.85■□□□□ 0.29
Metazoa_SRP.170-201ENST00000616060 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
Metazoa_SRP.170-201ENST00000616060 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
Metazoa_SRP.170-201ENST00000616060 CAPN15O75808 1086 aa16.7■□□□□ 0.26
Metazoa_SRP.170-201ENST00000616060 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
Metazoa_SRP.170-201ENST00000616060 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
Metazoa_SRP.170-201ENST00000616060 DSG3P32926 999 aa16.5■□□□□ 0.23
Metazoa_SRP.170-201ENST00000616060 ABCB7O75027 752 aa16.38■□□□□ 0.21
Metazoa_SRP.170-201ENST00000616060 POLA2Q14181 598 aa16.36■□□□□ 0.21
Metazoa_SRP.170-201ENST00000616060 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
Metazoa_SRP.170-201ENST00000616060 FBLN2P98095 1184 aa16.04■□□□□ 0.16
Metazoa_SRP.170-201ENST00000616060 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
Metazoa_SRP.170-201ENST00000616060 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
Metazoa_SRP.170-201ENST00000616060 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
Metazoa_SRP.170-201ENST00000616060 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
Metazoa_SRP.170-201ENST00000616060 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
Metazoa_SRP.170-201ENST00000616060 SPDYE2Q495Y8 402 aa15.72■□□□□ 0.11
Metazoa_SRP.170-201ENST00000616060 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
Metazoa_SRP.170-201ENST00000616060 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
Metazoa_SRP.170-201ENST00000616060 FKBP8Q14318 412 aa15.61■□□□□ 0.09
Metazoa_SRP.170-201ENST00000616060 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
Metazoa_SRP.170-201ENST00000616060 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
Metazoa_SRP.170-201ENST00000616060 PROM2Q8N271 834 aa15.49■□□□□ 0.07
Metazoa_SRP.170-201ENST00000616060 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
Metazoa_SRP.170-201ENST00000616060 REM2Q8IYK8 340 aaPredicted RBP15.36■□□□□ 0.05
Metazoa_SRP.170-201ENST00000616060 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
Metazoa_SRP.170-201ENST00000616060 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
Metazoa_SRP.170-201ENST00000616060 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
Metazoa_SRP.170-201ENST00000616060 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
Metazoa_SRP.170-201ENST00000616060 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
Metazoa_SRP.170-201ENST00000616060 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
Metazoa_SRP.170-201ENST00000616060 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
Metazoa_SRP.170-201ENST00000616060 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
Metazoa_SRP.170-201ENST00000616060 VASPP50552 380 aaPredicted RBP14.91□□□□□ -0.02
Metazoa_SRP.170-201ENST00000616060 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
Metazoa_SRP.170-201ENST00000616060 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
Metazoa_SRP.170-201ENST00000616060 PRKAR2AP13861 404 aaKnown RBP14.78□□□□□ -0.04
Metazoa_SRP.170-201ENST00000616060 MIER1Q8N108 512 aa14.78□□□□□ -0.04
Metazoa_SRP.170-201ENST00000616060 PLCD3Q8N3E9 789 aa14.77□□□□□ -0.05
Metazoa_SRP.170-201ENST00000616060 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
Metazoa_SRP.170-201ENST00000616060 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
Metazoa_SRP.170-201ENST00000616060 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
Metazoa_SRP.170-201ENST00000616060 IFNLR1Q8IU57 520 aaPredicted RBP14.69□□□□□ -0.06
Metazoa_SRP.170-201ENST00000616060 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
Metazoa_SRP.170-201ENST00000616060 FARP1Q9Y4F1 1045 aaPredicted RBP14.65□□□□□ -0.06
Metazoa_SRP.170-201ENST00000616060 POTEHQ6S545 545 aa14.61□□□□□ -0.07
Metazoa_SRP.170-201ENST00000616060 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
Metazoa_SRP.170-201ENST00000616060 KLHL34Q8N239 644 aa14.56□□□□□ -0.08
Metazoa_SRP.170-201ENST00000616060 SPOCK2Q92563 424 aa14.51□□□□□ -0.09
Metazoa_SRP.170-201ENST00000616060 NUBP1P53384 320 aa14.49□□□□□ -0.09
Metazoa_SRP.170-201ENST00000616060 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
Metazoa_SRP.170-201ENST00000616060 RASEFQ8IZ41 740 aa14.42□□□□□ -0.1
Metazoa_SRP.170-201ENST00000616060 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
Metazoa_SRP.170-201ENST00000616060 FAM212AQ96EL1 285 aa14.36□□□□□ -0.11
Metazoa_SRP.170-201ENST00000616060 HAX1O00165 279 aa14.33□□□□□ -0.12
Metazoa_SRP.170-201ENST00000616060 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
Metazoa_SRP.170-201ENST00000616060 GSE1Q14687 1217 aa14.3□□□□□ -0.12
Metazoa_SRP.170-201ENST00000616060 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
Metazoa_SRP.170-201ENST00000616060 CCDC61Q9Y6R9 512 aa14.27□□□□□ -0.13
Metazoa_SRP.170-201ENST00000616060 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
Metazoa_SRP.170-201ENST00000616060 EVX2Q03828 476 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms