Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 AC091874.3-201ENST00000512672 1195 ntBASIC22.49■■□□□ 1.19
CLIC4Q9Y696 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 AC005829.2-201ENST00000571422 1056 ntBASIC22.49■■□□□ 1.19
CLIC4Q9Y696 AC092118.2-201ENST00000613495 667 ntBASIC22.49■■□□□ 1.19
CLIC4Q9Y696 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 AP000974.1-201ENST00000623909 2387 ntBASIC22.49■■□□□ 1.19
CLIC4Q9Y696 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CLIC4Q9Y696 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 AC006557.6-201ENST00000623071 864 ntBASIC22.48■■□□□ 1.19
CLIC4Q9Y696 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLIC4Q9Y696 AC124283.5-201ENST00000624661 1809 ntBASIC22.47■■□□□ 1.19
CLIC4Q9Y696 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLIC4Q9Y696 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 AL032819.2-201ENST00000624543 2162 ntBASIC22.46■■□□□ 1.19
CLIC4Q9Y696 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 AC098934.4-201ENST00000564127 592 ntBASIC22.46■■□□□ 1.19
CLIC4Q9Y696 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 TFP1-202ENST00000475455 1573 ntBASIC22.46■■□□□ 1.19
CLIC4Q9Y696 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLIC4Q9Y696 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.45■■□□□ 1.19
CLIC4Q9Y696 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms