Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 AL121603.2-201ENST00000557373 2117 ntBASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 AC006128.1-201ENST00000624704 1661 ntBASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX11Q9Y5W9 KRT18P22-201ENST00000402024 1347 ntBASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 KRT8P17-201ENST00000453110 1448 ntBASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX11Q9Y5W9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 TERF1P1-201ENST00000311003 1181 ntBASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 AL137013.1-201ENST00000432946 1228 ntBASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNX11Q9Y5W9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX11Q9Y5W9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.52■□□□□ 0.71
SNX11Q9Y5W9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
SNX11Q9Y5W9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.52■□□□□ 0.71
SNX11Q9Y5W9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX11Q9Y5W9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.51■□□□□ 0.71
SNX11Q9Y5W9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SNX11Q9Y5W9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX11Q9Y5W9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX11Q9Y5W9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX11Q9Y5W9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
SNX11Q9Y5W9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX11Q9Y5W9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX11Q9Y5W9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms