Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 AL353807.1-201ENST00000427475 662 ntBASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 TSPY15P-201ENST00000457163 923 ntBASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB2Q9Y5E7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 SMG8-203ENST00000578922 2178 ntBASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB2Q9Y5E7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB2Q9Y5E7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 AC211429.1-201ENST00000415277 523 ntBASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 ECEL1P3-201ENST00000427961 737 ntBASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 CD177P1-201ENST00000606252 935 ntBASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 AC026471.5-201ENST00000615068 467 ntBASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB2Q9Y5E7 AC099778.1-201ENST00000568593 1911 ntBASIC21.58■■□□□ 1.04
PCDHB2Q9Y5E7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB2Q9Y5E7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB2Q9Y5E7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB2Q9Y5E7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PCDHB2Q9Y5E7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 KRT16P6-202ENST00000425692 1426 ntBASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 FAM197Y1-201ENST00000421178 764 ntBASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 AL355075.4-201ENST00000554988 638 ntBASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB2Q9Y5E7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB2Q9Y5E7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms