Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
YIPF1Q9Y548 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF1Q9Y548 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
YIPF1Q9Y548 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.64■□□□□ 0.89
YIPF1Q9Y548 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.64■□□□□ 0.89
YIPF1Q9Y548 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 RN7SL850P-201ENST00000579959 291 ntBASIC20.63■□□□□ 0.89
YIPF1Q9Y548 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 AC010947.1-201ENST00000623454 693 ntBASIC20.63■□□□□ 0.89
YIPF1Q9Y548 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF1Q9Y548 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 LINC01568-207ENST00000641790 1380 ntBASIC20.62■□□□□ 0.89
YIPF1Q9Y548 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 AC011506.1-201ENST00000474329 610 ntBASIC20.62■□□□□ 0.89
YIPF1Q9Y548 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 AC131212.4-201ENST00000623606 975 ntBASIC20.62■□□□□ 0.89
YIPF1Q9Y548 HLA-A-209ENST00000638375 975 ntBASIC20.62■□□□□ 0.89
YIPF1Q9Y548 TMEM179-206ENST00000616017 1645 ntBASIC20.62■□□□□ 0.89
YIPF1Q9Y548 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
YIPF1Q9Y548 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 TMPOP1-202ENST00000424642 1267 ntBASIC20.61■□□□□ 0.89
YIPF1Q9Y548 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 DGCR10-201ENST00000609839 495 ntBASIC20.61■□□□□ 0.89
YIPF1Q9Y548 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 AC073314.1-201ENST00000568729 2216 ntBASIC20.61■□□□□ 0.89
YIPF1Q9Y548 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF1Q9Y548 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 AC005363.2-201ENST00000618631 242 ntBASIC20.6■□□□□ 0.89
YIPF1Q9Y548 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF1Q9Y548 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.59■□□□□ 0.89
YIPF1Q9Y548 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF1Q9Y548 AL137060.1-201ENST00000618151 2648 ntBASIC20.59■□□□□ 0.89
YIPF1Q9Y548 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF1Q9Y548 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.59■□□□□ 0.89
YIPF1Q9Y548 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF1Q9Y548 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.59■□□□□ 0.89
YIPF1Q9Y548 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.59■□□□□ 0.89
YIPF1Q9Y548 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms