Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RCL1Q9Y2P8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 LTB4R2-202ENST00000528054 3092 ntBASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RCL1Q9Y2P8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 CROCCP3-202ENST00000420820 1947 ntBASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 AC007322.3-201ENST00000426526 701 ntBASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 AC012414.1-201ENST00000556676 535 ntBASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RCL1Q9Y2P8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 AC010141.2-201ENST00000452426 721 ntBASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 AC079140.4-201ENST00000507448 529 ntBASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 AC027682.1-201ENST00000562846 899 ntBASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 AL136162.1-201ENST00000607711 1078 ntBASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCL1Q9Y2P8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCL1Q9Y2P8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms