Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 PRKY-204ENST00000533551 1019 ntBASIC22.65■■□□□ 1.22
DDX41Q9UJV9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX41Q9UJV9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX41Q9UJV9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.64■■□□□ 1.22
DDX41Q9UJV9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.64■■□□□ 1.22
DDX41Q9UJV9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.64■■□□□ 1.21
DDX41Q9UJV9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX41Q9UJV9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 AL049637.2-201ENST00000641778 930 ntBASIC22.63■■□□□ 1.21
DDX41Q9UJV9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX41Q9UJV9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 TSPY7P-201ENST00000431358 1114 ntBASIC22.62■■□□□ 1.21
DDX41Q9UJV9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 RARRES2P10-201ENST00000564312 460 ntBASIC22.62■■□□□ 1.21
DDX41Q9UJV9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX41Q9UJV9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 AL135905.2-201ENST00000584934 1404 ntBASIC22.61■■□□□ 1.21
DDX41Q9UJV9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX41Q9UJV9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms