Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.26■□□□□ 0.99
CXXC1Q9P0U4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 AL024507.2-201ENST00000606070 2574 ntBASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 AC069148.1-201ENST00000608741 768 ntBASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 AL031432.5-201ENST00000641059 760 ntBASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 Z98882.1-201ENST00000622160 2253 ntBASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC1Q9P0U4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 AC005229.4-201ENST00000610085 2198 ntBASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.24■□□□□ 0.99
CXXC1Q9P0U4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 AL049796.1-201ENST00000565336 1766 ntBASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 TSPY17P-201ENST00000450329 467 ntBASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 PRSS44-201ENST00000515154 1146 ntBASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 AL353719.1-201ENST00000566847 864 ntBASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 AC140113.3-201ENST00000605663 199 ntBASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CXXC1Q9P0U4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CXXC1Q9P0U4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 AL691432.3-201ENST00000621860 400 ntBASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC1Q9P0U4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CXXC1Q9P0U4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CXXC1Q9P0U4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 Z85996.1-201ENST00000494644 937 ntBASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 AC008622.2-201ENST00000617006 1229 ntBASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC1Q9P0U4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms