Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC52A3Q9NQ40 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC52A3Q9NQ40 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC52A3Q9NQ40 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC52A3Q9NQ40 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC52A3Q9NQ40 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC52A3Q9NQ40 AL049812.1-201ENST00000432563 2267 ntBASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC52A3Q9NQ40 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 AC034268.1-201ENST00000441047 882 ntBASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 C2orf69P4-201ENST00000565394 541 ntBASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC52A3Q9NQ40 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 AC011767.1-201ENST00000617410 1153 ntBASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 AC006333.2-201ENST00000607957 2099 ntBASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC52A3Q9NQ40 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC52A3Q9NQ40 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 TEX21P-204ENST00000641479 1693 ntBASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms