Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC40Q9H9A6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC40Q9H9A6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
LRRC40Q9H9A6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC40Q9H9A6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC40Q9H9A6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC40Q9H9A6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 AC116351.2-201ENST00000606540 1585 ntBASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 AC018553.1-201ENST00000616682 1458 ntBASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 AL109923.1-201ENST00000618799 583 ntBASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRC40Q9H9A6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 RNF165-205ENST00000588679 2904 ntBASIC20■□□□□ 0.79
LRRC40Q9H9A6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 PWWP2AP1-201ENST00000429776 2273 ntBASIC20■□□□□ 0.79
LRRC40Q9H9A6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC40Q9H9A6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LRRC40Q9H9A6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 AL138781.1-201ENST00000566567 1274 ntBASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 HLA-B-256ENST00000639848 1089 ntBASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC40Q9H9A6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.98■□□□□ 0.79
LRRC40Q9H9A6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC40Q9H9A6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms