Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF38Q9H0F5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF38Q9H0F5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 AC092667.1-201ENST00000434301 2586 ntBASIC20.46■□□□□ 0.87
RNF38Q9H0F5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.46■□□□□ 0.87
RNF38Q9H0F5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 AL162377.1-201ENST00000618844 1793 ntBASIC20.46■□□□□ 0.87
RNF38Q9H0F5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
RNF38Q9H0F5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 TUBB8P6-201ENST00000436895 1288 ntBASIC20.45■□□□□ 0.86
RNF38Q9H0F5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF38Q9H0F5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 KRT16P1-201ENST00000399124 1418 ntBASIC20.44■□□□□ 0.86
RNF38Q9H0F5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 LINC01023-201ENST00000606054 436 ntBASIC20.44■□□□□ 0.86
RNF38Q9H0F5 AC133561.5-201ENST00000635547 218 ntBASIC20.44■□□□□ 0.86
RNF38Q9H0F5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF38Q9H0F5 AC079598.2-202ENST00000546624 1451 ntBASIC20.43■□□□□ 0.86
RNF38Q9H0F5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 RBM17P1-201ENST00000453646 1190 ntBASIC20.43■□□□□ 0.86
RNF38Q9H0F5 AC116562.2-201ENST00000507042 360 ntBASIC20.43■□□□□ 0.86
RNF38Q9H0F5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RNF38Q9H0F5 AL691432.2-201ENST00000607222 2038 ntBASIC20.43■□□□□ 0.86
RNF38Q9H0F5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF38Q9H0F5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF38Q9H0F5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.41■□□□□ 0.86
RNF38Q9H0F5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms