Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAF4Q9BUZ4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF4Q9BUZ4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 AC142381.4-202ENST00000563973 229 ntBASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 AC073648.6-201ENST00000641589 218 ntBASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 AP006294.2-201ENST00000641667 209 ntBASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRAF4Q9BUZ4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 AL158047.1-201ENST00000445918 881 ntBASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 AL512408.1-201ENST00000569378 2000 ntBASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF4Q9BUZ4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 AC116050.2-201ENST00000612102 1779 ntBASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 PLK5-205ENST00000642079 1969 ntBASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF4Q9BUZ4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 AC093503.3-201ENST00000624917 2352 ntBASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 PNMA6B-201ENST00000538162 1200 ntBASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 AC008403.3-201ENST00000598924 454 ntBASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 AC105020.6-201ENST00000621523 1217 ntBASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF4Q9BUZ4 AC005332.7-201ENST00000614046 2005 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms