Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 AL596275.1-201ENST00000423464 877 ntBASIC18.83■□□□□ 0.6
NDC1Q9BTX1 KRT16P5-201ENST00000455284 522 ntBASIC18.83■□□□□ 0.6
NDC1Q9BTX1 AC107956.1-201ENST00000494359 873 ntBASIC18.83■□□□□ 0.6
NDC1Q9BTX1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 RARRES2P10-201ENST00000564312 460 ntBASIC18.83■□□□□ 0.6
NDC1Q9BTX1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDC1Q9BTX1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 AC020907.5-201ENST00000624372 1936 ntBASIC18.82■□□□□ 0.6
NDC1Q9BTX1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDC1Q9BTX1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 AC092667.1-201ENST00000434301 2586 ntBASIC18.81■□□□□ 0.6
NDC1Q9BTX1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDC1Q9BTX1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 AC233702.5-201ENST00000584107 538 ntBASIC18.8■□□□□ 0.6
NDC1Q9BTX1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NDC1Q9BTX1 AP006587.1-201ENST00000534129 1502 ntBASIC18.79■□□□□ 0.6
NDC1Q9BTX1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 PHGDH-210ENST00000641115 1638 ntBASIC18.79■□□□□ 0.6
NDC1Q9BTX1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 MIR4497-201ENST00000583208 89 ntBASIC18.79■□□□□ 0.6
NDC1Q9BTX1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDC1Q9BTX1 AC116351.2-201ENST00000606540 1585 ntBASIC18.79■□□□□ 0.6
NDC1Q9BTX1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms