Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 TFP1-202ENST00000475455 1573 ntBASIC17.36■□□□□ 0.37
FOXB1Q99853 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
FOXB1Q99853 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXB1Q99853 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXB1Q99853 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 AL121829.2-201ENST00000620908 328 ntBASIC17.36■□□□□ 0.37
FOXB1Q99853 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXB1Q99853 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXB1Q99853 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXB1Q99853 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXB1Q99853 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXB1Q99853 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXB1Q99853 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXB1Q99853 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXB1Q99853 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXB1Q99853 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXB1Q99853 MIR4651-201ENST00000582622 73 ntBASIC17.35■□□□□ 0.37
FOXB1Q99853 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXB1Q99853 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXB1Q99853 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXB1Q99853 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXB1Q99853 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXB1Q99853 AFG3L1P-217ENST00000557444 2447 ntBASIC17.35■□□□□ 0.37
FOXB1Q99853 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXB1Q99853 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
FOXB1Q99853 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
FOXB1Q99853 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
FOXB1Q99853 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXB1Q99853 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXB1Q99853 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXB1Q99853 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FOXB1Q99853 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXB1Q99853 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
FOXB1Q99853 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.33■□□□□ 0.37
FOXB1Q99853 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FOXB1Q99853 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
FOXB1Q99853 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXB1Q99853 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXB1Q99853 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FOXB1Q99853 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FOXB1Q99853 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXB1Q99853 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXB1Q99853 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
FOXB1Q99853 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXB1Q99853 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.33■□□□□ 0.36
FOXB1Q99853 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXB1Q99853 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXB1Q99853 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms