Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LITAFQ99732 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.13□□□□□ -0.31
LITAFQ99732 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.13□□□□□ -0.31
LITAFQ99732 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.13□□□□□ -0.31
LITAFQ99732 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.13□□□□□ -0.31
LITAFQ99732 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LITAFQ99732 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LITAFQ99732 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.12□□□□□ -0.31
LITAFQ99732 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
LITAFQ99732 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 AP001271.2-201ENST00000624018 1556 ntBASIC13.12□□□□□ -0.31
LITAFQ99732 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.12□□□□□ -0.31
LITAFQ99732 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.12□□□□□ -0.31
LITAFQ99732 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.12□□□□□ -0.31
LITAFQ99732 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.12□□□□□ -0.31
LITAFQ99732 AL356740.2-201ENST00000601559 647 ntBASIC13.12□□□□□ -0.31
LITAFQ99732 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.12□□□□□ -0.31
LITAFQ99732 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LITAFQ99732 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.12□□□□□ -0.31
LITAFQ99732 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.12□□□□□ -0.31
LITAFQ99732 FP475955.4-201ENST00000623131 1990 ntBASIC13.12□□□□□ -0.31
LITAFQ99732 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.12□□□□□ -0.31
LITAFQ99732 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
LITAFQ99732 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LITAFQ99732 AC139713.2-201ENST00000641328 2723 ntBASIC13.12□□□□□ -0.31
LITAFQ99732 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LITAFQ99732 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LITAFQ99732 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.11□□□□□ -0.31
LITAFQ99732 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LITAFQ99732 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.11□□□□□ -0.31
LITAFQ99732 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LITAFQ99732 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.11□□□□□ -0.31
LITAFQ99732 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 AC141586.3-201ENST00000562166 1838 ntBASIC13.11□□□□□ -0.31
LITAFQ99732 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.11□□□□□ -0.31
LITAFQ99732 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.11□□□□□ -0.31
LITAFQ99732 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LITAFQ99732 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.1□□□□□ -0.31
LITAFQ99732 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 MKRN4P-201ENST00000444706 1521 ntBASIC13.1□□□□□ -0.31
LITAFQ99732 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
LITAFQ99732 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LITAFQ99732 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
LITAFQ99732 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms