Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.14■□□□□ 0.97
RAD9AQ99638 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.14■□□□□ 0.97
RAD9AQ99638 HLA-A-209ENST00000638375 975 ntBASIC21.14■□□□□ 0.97
RAD9AQ99638 AL031432.5-201ENST00000641059 760 ntBASIC21.14■□□□□ 0.97
RAD9AQ99638 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAD9AQ99638 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAD9AQ99638 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAD9AQ99638 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAD9AQ99638 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAD9AQ99638 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.14■□□□□ 0.97
RAD9AQ99638 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RAD9AQ99638 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAD9AQ99638 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 AC092338.2-201ENST00000568827 1415 ntBASIC21.13■□□□□ 0.97
RAD9AQ99638 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 AC005229.4-201ENST00000610085 2198 ntBASIC21.13■□□□□ 0.97
RAD9AQ99638 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.13■□□□□ 0.97
RAD9AQ99638 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.13■□□□□ 0.97
RAD9AQ99638 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.13■□□□□ 0.97
RAD9AQ99638 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAD9AQ99638 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.13■□□□□ 0.97
RAD9AQ99638 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD9AQ99638 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RAD9AQ99638 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.12■□□□□ 0.97
RAD9AQ99638 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAD9AQ99638 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.12■□□□□ 0.97
RAD9AQ99638 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAD9AQ99638 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.12■□□□□ 0.97
RAD9AQ99638 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.12■□□□□ 0.97
RAD9AQ99638 AL512604.3-201ENST00000569583 964 ntBASIC21.12■□□□□ 0.97
RAD9AQ99638 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.12■□□□□ 0.97
RAD9AQ99638 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD9AQ99638 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD9AQ99638 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.12■□□□□ 0.97
RAD9AQ99638 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAD9AQ99638 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAD9AQ99638 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.12■□□□□ 0.97
RAD9AQ99638 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RAD9AQ99638 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RAD9AQ99638 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAD9AQ99638 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.11■□□□□ 0.97
RAD9AQ99638 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAD9AQ99638 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
RAD9AQ99638 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
RAD9AQ99638 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.11■□□□□ 0.97
RAD9AQ99638 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.11■□□□□ 0.97
RAD9AQ99638 TSPY17P-201ENST00000450329 467 ntBASIC21.11■□□□□ 0.97
RAD9AQ99638 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAD9AQ99638 HOMER2P1-201ENST00000455653 964 ntBASIC21.11■□□□□ 0.97
RAD9AQ99638 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.11■□□□□ 0.97
RAD9AQ99638 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
RAD9AQ99638 AL023803.3-201ENST00000615559 522 ntBASIC21.11■□□□□ 0.97
RAD9AQ99638 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.11■□□□□ 0.97
RAD9AQ99638 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAD9AQ99638 DPP3P2-201ENST00000416030 1696 ntBASIC21.11■□□□□ 0.97
RAD9AQ99638 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAD9AQ99638 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAD9AQ99638 IER3-202ENST00000376377 1350 ntBASIC21.1■□□□□ 0.97
RAD9AQ99638 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD9AQ99638 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RAD9AQ99638 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAD9AQ99638 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RAD9AQ99638 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAD9AQ99638 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAD9AQ99638 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD9AQ99638 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAD9AQ99638 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD9AQ99638 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.1■□□□□ 0.97
RAD9AQ99638 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.1■□□□□ 0.97
RAD9AQ99638 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.1■□□□□ 0.97
RAD9AQ99638 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.1■□□□□ 0.97
RAD9AQ99638 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.1■□□□□ 0.97
RAD9AQ99638 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.1■□□□□ 0.97
RAD9AQ99638 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
RAD9AQ99638 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAD9AQ99638 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RAD9AQ99638 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAD9AQ99638 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms