Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 PMS2P1-201ENST00000431037 1228 ntBASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 AL023973.1-201ENST00000624619 620 ntBASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 GUSBP5-202ENST00000510805 1989 ntBASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 ANOS2P-203ENST00000472227 1816 ntBASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 AC079781.3-201ENST00000449110 356 ntBASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 ZNF444P1-201ENST00000559497 298 ntBASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 AC007375.3-201ENST00000600936 2314 ntBASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTNAP3BQ96NU0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.83■□□□□ 0.61
CNTNAP3BQ96NU0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 AC244107.1-201ENST00000442033 332 ntBASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 CCR12P-201ENST00000446203 998 ntBASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 AC011506.1-201ENST00000474329 610 ntBASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 AC026271.3-201ENST00000571884 352 ntBASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTNAP3BQ96NU0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 C11orf96-202ENST00000528572 1834 ntBASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 AL139424.1-201ENST00000607572 797 ntBASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 AC083849.1-201ENST00000615227 514 ntBASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 AL445675.2-201ENST00000620291 557 ntBASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 ECEL1P1-201ENST00000373592 1742 ntBASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTNAP3BQ96NU0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.81■□□□□ 0.6
CNTNAP3BQ96NU0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms