Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 AL031432.3-201ENST00000607698 485 ntBASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 MIR572-201ENST00000384983 95 ntBASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP6Q96FZ7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 AC245052.3-201ENST00000450182 901 ntBASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 AC020916.1-201ENST00000587762 1774 ntBASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP6Q96FZ7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 AL133373.2-201ENST00000623187 2828 ntBASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CHMP6Q96FZ7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms