Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 AL162412.1-201ENST00000567129 965 ntBASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 KRT8P20-201ENST00000423953 1409 ntBASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 AC120498.9-201ENST00000339021 3867 ntBASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 AC006015.1-201ENST00000429970 570 ntBASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 AL031963.3-201ENST00000606441 850 ntBASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 PTBP1P-201ENST00000554374 1601 ntBASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 AC004408.2-201ENST00000623613 2777 ntBASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FOXRED1Q96CU9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXRED1Q96CU9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
FOXRED1Q96CU9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 TERF1P5-201ENST00000477545 1207 ntBASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 BID-214ENST00000617586 542 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 MYCNOS-205ENST00000641950 531 ntBASIC17.08■□□□□ 0.32
FOXRED1Q96CU9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms