Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
USP6NLQ92738 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
USP6NLQ92738 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.39■■□□□ 1.17
USP6NLQ92738 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
USP6NLQ92738 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.39■■□□□ 1.17
USP6NLQ92738 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.39■■□□□ 1.17
USP6NLQ92738 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.39■■□□□ 1.17
USP6NLQ92738 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.39■■□□□ 1.17
USP6NLQ92738 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
USP6NLQ92738 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.39■■□□□ 1.17
USP6NLQ92738 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
USP6NLQ92738 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
USP6NLQ92738 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.39■■□□□ 1.17
USP6NLQ92738 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.39■■□□□ 1.17
USP6NLQ92738 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
USP6NLQ92738 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
USP6NLQ92738 AC096733.2-201ENST00000609937 1394 ntBASIC22.38■■□□□ 1.17
USP6NLQ92738 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
USP6NLQ92738 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USP6NLQ92738 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
USP6NLQ92738 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
USP6NLQ92738 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
USP6NLQ92738 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.38■■□□□ 1.17
USP6NLQ92738 LINC01238-205ENST00000567549 1107 ntBASIC22.38■■□□□ 1.17
USP6NLQ92738 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.38■■□□□ 1.17
USP6NLQ92738 AC139887.4-201ENST00000607877 719 ntBASIC22.38■■□□□ 1.17
USP6NLQ92738 HLA-A-209ENST00000638375 975 ntBASIC22.38■■□□□ 1.17
USP6NLQ92738 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.38■■□□□ 1.17
USP6NLQ92738 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.38■■□□□ 1.17
USP6NLQ92738 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.38■■□□□ 1.17
USP6NLQ92738 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.37■■□□□ 1.17
USP6NLQ92738 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
USP6NLQ92738 RNF152P1-201ENST00000397754 604 ntBASIC22.37■■□□□ 1.17
USP6NLQ92738 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
USP6NLQ92738 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
USP6NLQ92738 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.37■■□□□ 1.17
USP6NLQ92738 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.37■■□□□ 1.17
USP6NLQ92738 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.37■■□□□ 1.17
USP6NLQ92738 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.37■■□□□ 1.17
USP6NLQ92738 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.37■■□□□ 1.17
USP6NLQ92738 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
USP6NLQ92738 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 AC011298.2-201ENST00000617989 482 ntBASIC22.37■■□□□ 1.17
USP6NLQ92738 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.37■■□□□ 1.17
USP6NLQ92738 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
USP6NLQ92738 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USP6NLQ92738 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
USP6NLQ92738 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.36■■□□□ 1.17
USP6NLQ92738 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.36■■□□□ 1.17
USP6NLQ92738 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.36■■□□□ 1.17
USP6NLQ92738 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.36■■□□□ 1.17
USP6NLQ92738 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.36■■□□□ 1.17
USP6NLQ92738 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
USP6NLQ92738 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.36■■□□□ 1.17
USP6NLQ92738 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USP6NLQ92738 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
USP6NLQ92738 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.35■■□□□ 1.17
USP6NLQ92738 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
USP6NLQ92738 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
USP6NLQ92738 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.35■■□□□ 1.17
USP6NLQ92738 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.35■■□□□ 1.17
USP6NLQ92738 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.35■■□□□ 1.17
USP6NLQ92738 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
USP6NLQ92738 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.35■■□□□ 1.17
USP6NLQ92738 AC116562.4-202ENST00000641738 218 ntBASIC22.35■■□□□ 1.17
USP6NLQ92738 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 DPP3P2-201ENST00000416030 1696 ntBASIC22.35■■□□□ 1.17
USP6NLQ92738 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.35■■□□□ 1.17
USP6NLQ92738 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
USP6NLQ92738 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USP6NLQ92738 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.35■■□□□ 1.17
USP6NLQ92738 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
USP6NLQ92738 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms