Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 AC083906.2-201ENST00000511578 360 ntBASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 AC120498.9-201ENST00000339021 3867 ntBASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 KRT8P36-201ENST00000489121 1440 ntBASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB40AQ8WXH6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 AC133552.2-202ENST00000575694 574 ntBASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 AC243732.1-201ENST00000612648 864 ntBASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40AQ8WXH6 AC068338.2-201ENST00000563278 1430 ntBASIC17.27■□□□□ 0.35
RAB40AQ8WXH6 RBM17P2-201ENST00000616397 1405 ntBASIC17.27■□□□□ 0.35
RAB40AQ8WXH6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.27■□□□□ 0.35
RAB40AQ8WXH6 AC138932.1-201ENST00000534164 6830 ntBASIC17.27■□□□□ 0.35
RAB40AQ8WXH6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40AQ8WXH6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40AQ8WXH6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 AF201337.1-201ENST00000520239 748 ntBASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms