Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CKAP2Q8WWK9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.58■□□□□ 0.72
CKAP2Q8WWK9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CKAP2Q8WWK9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CKAP2Q8WWK9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.58■□□□□ 0.72
CKAP2Q8WWK9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4L2-201ENST00000561772 1275 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4L6-201ENST00000626483 1275 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4L1-201ENST00000627662 1275 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4L8-201ENST00000629013 1275 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4L3-201ENST00000630187 1275 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4L7-201ENST00000630678 1275 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 DUX4L5-201ENST00000630834 1275 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 KRT16P6-202ENST00000425692 1426 ntBASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.57■□□□□ 0.72
CKAP2Q8WWK9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 PGM5P4-201ENST00000421970 445 ntBASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 AC090164.3-201ENST00000610780 2143 ntBASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 AC018470.1-201ENST00000624790 3129 ntBASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CKAP2Q8WWK9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 AC087633.2-202ENST00000565166 1439 ntBASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKAP2Q8WWK9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKAP2Q8WWK9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms