Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 AC023632.3-201ENST00000521633 145 ntBASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 DUX4L16-201ENST00000555130 1264 ntBASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A1Q8WWI5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC44A1Q8WWI5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 AC137761.2-201ENST00000561729 223 ntBASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 AC145350.3-201ENST00000569033 163 ntBASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC44A1Q8WWI5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 AC087623.3-201ENST00000607047 1098 ntBASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 MIR5787-201ENST00000611784 55 ntBASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 MIR6821-201ENST00000617625 74 ntBASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A1Q8WWI5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 AL355472.2-201ENST00000422958 438 ntBASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 C2orf69P4-201ENST00000565394 541 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms