Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 KRT18P48-201ENST00000434763 852 ntBASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
U2AF1L4Q8WU68 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 EGLN1P1-201ENST00000531623 762 ntBASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
U2AF1L4Q8WU68 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 AL049796.1-201ENST00000565336 1766 ntBASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 MYC-208ENST00000641036 567 ntBASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.54■■□□□ 1.2
U2AF1L4Q8WU68 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 TSPY14P-201ENST00000303979 915 ntBASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 AC026396.1-201ENST00000419388 421 ntBASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.53■■□□□ 1.2
U2AF1L4Q8WU68 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 AC009947.2-201ENST00000444014 672 ntBASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
U2AF1L4Q8WU68 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 AL031133.1-201ENST00000406807 723 ntBASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.51■■□□□ 1.19
U2AF1L4Q8WU68 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms