Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 AP000692.2-201ENST00000608391 879 ntBASIC15.38■□□□□ 0.05
LINC01006Q8NI28 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 RCC2P6-201ENST00000526625 1557 ntBASIC15.37■□□□□ 0.05
LINC01006Q8NI28 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 AC087388.1-201ENST00000571370 1112 ntBASIC15.37■□□□□ 0.05
LINC01006Q8NI28 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 AC011298.2-201ENST00000617989 482 ntBASIC15.37■□□□□ 0.05
LINC01006Q8NI28 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01006Q8NI28 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.36■□□□□ 0.05
LINC01006Q8NI28 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 AC004951.3-201ENST00000418645 1148 ntBASIC15.36■□□□□ 0.05
LINC01006Q8NI28 WWOX-216ENST00000569818 525 ntBASIC15.36■□□□□ 0.05
LINC01006Q8NI28 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 AC006011.2-201ENST00000621313 1158 ntBASIC15.36■□□□□ 0.05
LINC01006Q8NI28 HLA-A-209ENST00000638375 975 ntBASIC15.36■□□□□ 0.05
LINC01006Q8NI28 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 AC026310.3-201ENST00000625186 2373 ntBASIC15.36■□□□□ 0.05
LINC01006Q8NI28 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01006Q8NI28 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 INGX-201ENST00000359239 846 ntBASIC15.35■□□□□ 0.05
LINC01006Q8NI28 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 FAM87A-204ENST00000613235 858 ntBASIC15.35■□□□□ 0.05
LINC01006Q8NI28 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms