Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 AL023803.3-201ENST00000615559 522 ntBASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHDC9Q8NEP7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 COX11P1-201ENST00000489116 835 ntBASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 Z85996.1-201ENST00000494644 937 ntBASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KLHDC9Q8NEP7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 AC006128.1-201ENST00000624704 1661 ntBASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.84■■□□□ 1.09
KLHDC9Q8NEP7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 AC007225.1-201ENST00000566331 1836 ntBASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 AC141257.4-201ENST00000634557 245 ntBASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 AC136944.6-201ENST00000634818 245 ntBASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.83■■□□□ 1.09
KLHDC9Q8NEP7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
KLHDC9Q8NEP7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KLHDC9Q8NEP7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.83■■□□□ 1.08
KLHDC9Q8NEP7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 AC011558.1-201ENST00000623459 338 ntBASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 AP000550.4-202ENST00000639755 178 ntBASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KLHDC9Q8NEP7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 TMEM179-206ENST00000616017 1645 ntBASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHDC9Q8NEP7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms