Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM35BQ8NCS4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM35BQ8NCS4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.9■□□□□ 0.94
TMEM35BQ8NCS4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM35BQ8NCS4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM35BQ8NCS4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM35BQ8NCS4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM35BQ8NCS4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.89■□□□□ 0.94
TMEM35BQ8NCS4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM35BQ8NCS4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TMEM35BQ8NCS4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM35BQ8NCS4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 AL158211.5-201ENST00000623583 2518 ntBASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TMEM35BQ8NCS4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 TREX1-205ENST00000625293 1783 ntBASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 UNC93B4-201ENST00000505679 747 ntBASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 AC008687.6-201ENST00000596318 630 ntBASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM35BQ8NCS4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 UNC93B5-201ENST00000530315 699 ntBASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 AL121906.2-201ENST00000621597 723 ntBASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM35BQ8NCS4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms