Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PAF1Q8N7H5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 AC092667.1-201ENST00000434301 2586 ntBASIC20.22■□□□□ 0.83
PAF1Q8N7H5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 KRT18P29-201ENST00000397031 1267 ntBASIC20.22■□□□□ 0.83
PAF1Q8N7H5 POU5F1P3-201ENST00000428824 1078 ntBASIC20.22■□□□□ 0.83
PAF1Q8N7H5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 AL157384.1-201ENST00000445995 2473 ntBASIC20.22■□□□□ 0.83
PAF1Q8N7H5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PAF1Q8N7H5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 KRT8P17-201ENST00000453110 1448 ntBASIC20.21■□□□□ 0.83
PAF1Q8N7H5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 KRT17P3-201ENST00000420566 1262 ntBASIC20.21■□□□□ 0.83
PAF1Q8N7H5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 AC026366.1-201ENST00000488803 879 ntBASIC20.21■□□□□ 0.83
PAF1Q8N7H5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 UNC93B4-201ENST00000505679 747 ntBASIC20.21■□□□□ 0.83
PAF1Q8N7H5 AC006058.3-201ENST00000606217 1069 ntBASIC20.21■□□□□ 0.83
PAF1Q8N7H5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PAF1Q8N7H5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.2■□□□□ 0.83
PAF1Q8N7H5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 KRT16P6-202ENST00000425692 1426 ntBASIC20.2■□□□□ 0.82
PAF1Q8N7H5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 LINC01006-201ENST00000333319 2292 ntBASIC20.2■□□□□ 0.82
PAF1Q8N7H5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.2■□□□□ 0.82
PAF1Q8N7H5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PAF1Q8N7H5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms