Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 TCF3P1-201ENST00000423021 1937 ntBASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC33Q8N5R6 PTBP1P-201ENST00000554374 1601 ntBASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 AL691432.2-201ENST00000607222 2038 ntBASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 ECEL1P3-201ENST00000427961 737 ntBASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC33Q8N5R6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 AC005829.2-201ENST00000571422 1056 ntBASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 AC124016.1-201ENST00000609552 612 ntBASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 AC073912.3-201ENST00000624414 853 ntBASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC33Q8N5R6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 AC239809.2-201ENST00000415381 517 ntBASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC33Q8N5R6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC33Q8N5R6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC33Q8N5R6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC33Q8N5R6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC33Q8N5R6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC33Q8N5R6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 AL390719.1-204ENST00000412397 1219 ntBASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 REXO1L12P-201ENST00000622156 912 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms