Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 CD99P1-205ENST00000527459 561 ntBASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF2Q8N5M1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATPAF2Q8N5M1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 POM121L13P-201ENST00000422362 380 ntBASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 AC026366.1-201ENST00000488803 879 ntBASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.2■□□□□ 0.82
ATPAF2Q8N5M1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 AC008403.3-201ENST00000598924 454 ntBASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 TFP1-202ENST00000475455 1573 ntBASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
ATPAF2Q8N5M1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms