Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.05■□□□□ 0.48
ZNF440Q8IYI8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF440Q8IYI8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 AC090192.1-201ENST00000517740 490 ntBASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
ZNF440Q8IYI8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 AC069152.1-201ENST00000438030 544 ntBASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 AC142086.2-201ENST00000569753 217 ntBASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF440Q8IYI8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 PNMA6B-201ENST00000538162 1200 ntBASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 AC104771.1-201ENST00000603335 964 ntBASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 AC006557.6-201ENST00000623071 864 ntBASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF440Q8IYI8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF440Q8IYI8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF440Q8IYI8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF440Q8IYI8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF440Q8IYI8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.02■□□□□ 0.47
ZNF440Q8IYI8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ZNF440Q8IYI8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 TFP1-202ENST00000475455 1573 ntBASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 AL121906.2-201ENST00000621597 723 ntBASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ZNF440Q8IYI8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ZNF440Q8IYI8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF440Q8IYI8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms