Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 AC125437.2-201ENST00000625180 2167 ntBASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 RN7SL471P-201ENST00000580476 299 ntBASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.74■□□□□ 0.91
SCUBE3Q8IX30 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 SLC25A24-204ENST00000569674 2357 ntBASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCUBE3Q8IX30 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 AL023875.1-201ENST00000640777 796 ntBASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCUBE3Q8IX30 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 PRORSD1P-201ENST00000295112 541 ntBASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.71■□□□□ 0.91
SCUBE3Q8IX30 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SCUBE3Q8IX30 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms