Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RP1L1Q8IWN7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 AC009947.2-201ENST00000444014 672 ntBASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 HMGA1P5-201ENST00000412453 271 ntBASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RP1L1Q8IWN7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 AC006011.2-201ENST00000621313 1158 ntBASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RP1L1Q8IWN7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 Z98882.1-201ENST00000622160 2253 ntBASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RP1L1Q8IWN7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 AC011558.1-201ENST00000623459 338 ntBASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 TSPY14P-201ENST00000303979 915 ntBASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RP1L1Q8IWN7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms