Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 AL139384.1-201ENST00000612143 3047 ntBASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.85■□□□□ 0.45
CROCCP3Q8IVE0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 AIRN-201ENST00000601203 4374 ntBASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 AC055733.4-201ENST00000638462 1354 ntBASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 TSPY9P-201ENST00000440215 945 ntBASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 TSPY11P-201ENST00000442607 1045 ntBASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.84■□□□□ 0.45
CROCCP3Q8IVE0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CROCCP3Q8IVE0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CROCCP3Q8IVE0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 AL033527.3-201ENST00000566366 1196 ntBASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CROCCP3Q8IVE0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms