Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 SPDYE13P-201ENST00000445314 798 ntBASIC16.72■□□□□ 0.27
CSMD2Q7Z408 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 LINC01465-201ENST00000408887 1940 ntBASIC16.71■□□□□ 0.27
CSMD2Q7Z408 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 AC005229.4-201ENST00000610085 2198 ntBASIC16.71■□□□□ 0.27
CSMD2Q7Z408 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 AC010653.2-201ENST00000623505 997 ntBASIC16.71■□□□□ 0.27
CSMD2Q7Z408 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 HOMER2P1-201ENST00000455653 964 ntBASIC16.71■□□□□ 0.27
CSMD2Q7Z408 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD2Q7Z408 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 EMBP1-201ENST00000458200 901 ntBASIC16.7■□□□□ 0.26
CSMD2Q7Z408 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD2Q7Z408 MIR3180-1-201ENST00000580374 94 ntBASIC16.69■□□□□ 0.26
CSMD2Q7Z408 MIR3180-3-201ENST00000584616 94 ntBASIC16.69■□□□□ 0.26
CSMD2Q7Z408 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.69■□□□□ 0.26
CSMD2Q7Z408 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 AP000692.2-201ENST00000608391 879 ntBASIC16.69■□□□□ 0.26
CSMD2Q7Z408 AC116562.4-202ENST00000641738 218 ntBASIC16.69■□□□□ 0.26
CSMD2Q7Z408 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CSMD2Q7Z408 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 AL031008.1-201ENST00000619963 541 ntBASIC16.68■□□□□ 0.26
CSMD2Q7Z408 AC141257.4-201ENST00000634557 245 ntBASIC16.68■□□□□ 0.26
CSMD2Q7Z408 AC136944.6-201ENST00000634818 245 ntBASIC16.68■□□□□ 0.26
CSMD2Q7Z408 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD2Q7Z408 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms