Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KRT40Q6A162 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KRT40Q6A162 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KRT40Q6A162 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
KRT40Q6A162 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.83■■□□□ 1.25
KRT40Q6A162 HLA-B-256ENST00000639848 1089 ntBASIC22.83■■□□□ 1.25
KRT40Q6A162 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KRT40Q6A162 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KRT40Q6A162 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.83■■□□□ 1.25
KRT40Q6A162 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
KRT40Q6A162 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
KRT40Q6A162 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
KRT40Q6A162 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
KRT40Q6A162 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.82■■□□□ 1.24
KRT40Q6A162 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.82■■□□□ 1.24
KRT40Q6A162 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.82■■□□□ 1.24
KRT40Q6A162 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
KRT40Q6A162 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.82■■□□□ 1.24
KRT40Q6A162 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.82■■□□□ 1.24
KRT40Q6A162 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.82■■□□□ 1.24
KRT40Q6A162 AC092368.3-202ENST00000574180 1591 ntBASIC22.82■■□□□ 1.24
KRT40Q6A162 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.82■■□□□ 1.24
KRT40Q6A162 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.82■■□□□ 1.24
KRT40Q6A162 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.82■■□□□ 1.24
KRT40Q6A162 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
KRT40Q6A162 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.82■■□□□ 1.24
KRT40Q6A162 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
KRT40Q6A162 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.82■■□□□ 1.24
KRT40Q6A162 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
KRT40Q6A162 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
KRT40Q6A162 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.81■■□□□ 1.24
KRT40Q6A162 AC018553.1-201ENST00000616682 1458 ntBASIC22.81■■□□□ 1.24
KRT40Q6A162 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.81■■□□□ 1.24
KRT40Q6A162 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
KRT40Q6A162 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.81■■□□□ 1.24
KRT40Q6A162 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.81■■□□□ 1.24
KRT40Q6A162 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.81■■□□□ 1.24
KRT40Q6A162 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.81■■□□□ 1.24
KRT40Q6A162 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.81■■□□□ 1.24
KRT40Q6A162 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
KRT40Q6A162 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.81■■□□□ 1.24
KRT40Q6A162 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.81■■□□□ 1.24
KRT40Q6A162 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
KRT40Q6A162 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.81■■□□□ 1.24
KRT40Q6A162 AC116351.2-201ENST00000606540 1585 ntBASIC22.8■■□□□ 1.24
KRT40Q6A162 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
KRT40Q6A162 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KRT40Q6A162 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
KRT40Q6A162 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
KRT40Q6A162 PNMA6B-201ENST00000538162 1200 ntBASIC22.8■■□□□ 1.24
KRT40Q6A162 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.8■■□□□ 1.24
KRT40Q6A162 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.8■■□□□ 1.24
KRT40Q6A162 AC060766.5-201ENST00000590539 871 ntBASIC22.8■■□□□ 1.24
KRT40Q6A162 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.8■■□□□ 1.24
KRT40Q6A162 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KRT40Q6A162 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
KRT40Q6A162 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KRT40Q6A162 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
KRT40Q6A162 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
KRT40Q6A162 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KRT40Q6A162 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KRT40Q6A162 AC124283.5-201ENST00000624661 1809 ntBASIC22.8■■□□□ 1.24
KRT40Q6A162 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KRT40Q6A162 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.79■■□□□ 1.24
KRT40Q6A162 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
KRT40Q6A162 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
KRT40Q6A162 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.79■■□□□ 1.24
KRT40Q6A162 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.79■■□□□ 1.24
KRT40Q6A162 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
KRT40Q6A162 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.79■■□□□ 1.24
KRT40Q6A162 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.79■■□□□ 1.24
KRT40Q6A162 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.79■■□□□ 1.24
KRT40Q6A162 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KRT40Q6A162 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
KRT40Q6A162 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms