Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 AC006015.1-201ENST00000429970 570 ntBASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 AL589743.5-201ENST00000616611 1050 ntBASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.59■□□□□ 0.57
LRIF1Q5T3J3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.58■□□□□ 0.57
LRIF1Q5T3J3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 AC011767.1-201ENST00000617410 1153 ntBASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRIF1Q5T3J3 AC010980.2-201ENST00000587099 1412 ntBASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 AC016769.1-201ENST00000409132 1010 ntBASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 OR10C1-204ENST00000622521 1039 ntBASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.57■□□□□ 0.56
LRIF1Q5T3J3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 AC231657.2-201ENST00000624556 255 ntBASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 AC008694.1-202ENST00000636953 945 ntBASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRIF1Q5T3J3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms