Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CBWD3Q5JTY5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.33■■□□□ 1
CBWD3Q5JTY5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CBWD3Q5JTY5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.33■■□□□ 1
CBWD3Q5JTY5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CBWD3Q5JTY5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBWD3Q5JTY5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CBWD3Q5JTY5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBWD3Q5JTY5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.32■■□□□ 1
CBWD3Q5JTY5 UNC93B5-201ENST00000530315 699 ntBASIC21.32■■□□□ 1
CBWD3Q5JTY5 AC008687.6-201ENST00000596318 630 ntBASIC21.32■■□□□ 1
CBWD3Q5JTY5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CBWD3Q5JTY5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CBWD3Q5JTY5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CBWD3Q5JTY5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 UNC93B4-201ENST00000505679 747 ntBASIC21.31■■□□□ 1
CBWD3Q5JTY5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CBWD3Q5JTY5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBWD3Q5JTY5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 RNA5SP413-201ENST00000516373 109 ntBASIC21.3■■□□□ 1
CBWD3Q5JTY5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 AC008403.3-201ENST00000598924 454 ntBASIC21.3■■□□□ 1
CBWD3Q5JTY5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CBWD3Q5JTY5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD3Q5JTY5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.29■■□□□ 1
CBWD3Q5JTY5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CBWD3Q5JTY5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.29■■□□□ 1
CBWD3Q5JTY5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.29■■□□□ 1
CBWD3Q5JTY5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.29■■□□□ 1
CBWD3Q5JTY5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CBWD3Q5JTY5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.29■■□□□ 1
CBWD3Q5JTY5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.29■■□□□ 1
CBWD3Q5JTY5 AC093484.2-201ENST00000580996 2166 ntBASIC21.29■■□□□ 1
CBWD3Q5JTY5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD3Q5JTY5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD3Q5JTY5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD3Q5JTY5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD3Q5JTY5 KRT18P6-201ENST00000555540 1265 ntBASIC21.28■■□□□ 1
CBWD3Q5JTY5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
CBWD3Q5JTY5 AC007952.6-201ENST00000573168 2673 ntBASIC21.28■■□□□ 1
CBWD3Q5JTY5 AC003957.1-201ENST00000625108 2673 ntBASIC21.28■■□□□ 1
CBWD3Q5JTY5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD3Q5JTY5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD3Q5JTY5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.27■■□□□ 1
CBWD3Q5JTY5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD3Q5JTY5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms