Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 AL354751.1-201ENST00000412768 1863 ntBASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC6LQ2NKX8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 AC012313.1-201ENST00000593393 3059 ntBASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC6LQ2NKX8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.83■□□□□ 0.93
ERCC6LQ2NKX8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
ERCC6LQ2NKX8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC6LQ2NKX8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC6LQ2NKX8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC6LQ2NKX8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.83■□□□□ 0.92
ERCC6LQ2NKX8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC6LQ2NKX8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC6LQ2NKX8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ERCC6LQ2NKX8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.81■□□□□ 0.92
ERCC6LQ2NKX8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ERCC6LQ2NKX8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC6LQ2NKX8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC6LQ2NKX8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.81■□□□□ 0.92
ERCC6LQ2NKX8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms