Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.88■□□□□ 0.77
AP1S1P61966 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.88■□□□□ 0.77
AP1S1P61966 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.88■□□□□ 0.77
AP1S1P61966 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.88■□□□□ 0.77
AP1S1P61966 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.88■□□□□ 0.77
AP1S1P61966 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.88■□□□□ 0.77
AP1S1P61966 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
AP1S1P61966 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP1S1P61966 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
AP1S1P61966 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
AP1S1P61966 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
AP1S1P61966 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
AP1S1P61966 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.87■□□□□ 0.77
AP1S1P61966 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
AP1S1P61966 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.87■□□□□ 0.77
AP1S1P61966 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.87■□□□□ 0.77
AP1S1P61966 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.87■□□□□ 0.77
AP1S1P61966 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.87■□□□□ 0.77
AP1S1P61966 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.87■□□□□ 0.77
AP1S1P61966 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.87■□□□□ 0.77
AP1S1P61966 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP1S1P61966 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP1S1P61966 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
AP1S1P61966 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.86■□□□□ 0.77
AP1S1P61966 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
AP1S1P61966 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.86■□□□□ 0.77
AP1S1P61966 UBE2SP1-201ENST00000450587 669 ntBASIC19.86■□□□□ 0.77
AP1S1P61966 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.86■□□□□ 0.77
AP1S1P61966 KRT16P5-201ENST00000455284 522 ntBASIC19.86■□□□□ 0.77
AP1S1P61966 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
AP1S1P61966 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.86■□□□□ 0.77
AP1S1P61966 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.86■□□□□ 0.77
AP1S1P61966 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
AP1S1P61966 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP1S1P61966 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.86■□□□□ 0.77
AP1S1P61966 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
AP1S1P61966 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.85■□□□□ 0.77
AP1S1P61966 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.85■□□□□ 0.77
AP1S1P61966 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.85■□□□□ 0.77
AP1S1P61966 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
AP1S1P61966 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.85■□□□□ 0.77
AP1S1P61966 KRT18P16-201ENST00000510337 1294 ntBASIC19.85■□□□□ 0.77
AP1S1P61966 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.85■□□□□ 0.77
AP1S1P61966 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.85■□□□□ 0.77
AP1S1P61966 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.85■□□□□ 0.77
AP1S1P61966 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.85■□□□□ 0.77
AP1S1P61966 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
AP1S1P61966 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.85■□□□□ 0.77
AP1S1P61966 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
AP1S1P61966 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP1S1P61966 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.84■□□□□ 0.77
AP1S1P61966 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
AP1S1P61966 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.84■□□□□ 0.77
AP1S1P61966 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.84■□□□□ 0.77
AP1S1P61966 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
AP1S1P61966 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
AP1S1P61966 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.84■□□□□ 0.77
AP1S1P61966 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.84■□□□□ 0.77
AP1S1P61966 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.84■□□□□ 0.77
AP1S1P61966 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms