Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.87■□□□□ 0.61
VSX2P58304 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
VSX2P58304 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.87■□□□□ 0.61
VSX2P58304 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 AC099778.1-201ENST00000568593 1911 ntBASIC18.87■□□□□ 0.61
VSX2P58304 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.87■□□□□ 0.61
VSX2P58304 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VSX2P58304 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.86■□□□□ 0.61
VSX2P58304 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VSX2P58304 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.86■□□□□ 0.61
VSX2P58304 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.86■□□□□ 0.61
VSX2P58304 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.86■□□□□ 0.61
VSX2P58304 AC093827.2-201ENST00000512654 315 ntBASIC18.86■□□□□ 0.61
VSX2P58304 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.86■□□□□ 0.61
VSX2P58304 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.86■□□□□ 0.61
VSX2P58304 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.86■□□□□ 0.61
VSX2P58304 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.86■□□□□ 0.61
VSX2P58304 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.86■□□□□ 0.61
VSX2P58304 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
VSX2P58304 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.86■□□□□ 0.61
VSX2P58304 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
VSX2P58304 LINC01521-201ENST00000504184 1943 ntBASIC18.86■□□□□ 0.61
VSX2P58304 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.86■□□□□ 0.61
VSX2P58304 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSX2P58304 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
VSX2P58304 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.85■□□□□ 0.61
VSX2P58304 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VSX2P58304 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.85■□□□□ 0.61
VSX2P58304 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.85■□□□□ 0.61
VSX2P58304 AL691432.2-201ENST00000607222 2038 ntBASIC18.85■□□□□ 0.61
VSX2P58304 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VSX2P58304 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.85■□□□□ 0.61
VSX2P58304 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.85■□□□□ 0.61
VSX2P58304 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.85■□□□□ 0.61
VSX2P58304 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.85■□□□□ 0.61
VSX2P58304 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.85■□□□□ 0.61
VSX2P58304 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
VSX2P58304 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VSX2P58304 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.85■□□□□ 0.61
VSX2P58304 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSX2P58304 TFP1-202ENST00000475455 1573 ntBASIC18.85■□□□□ 0.61
VSX2P58304 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VSX2P58304 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.84■□□□□ 0.61
VSX2P58304 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
VSX2P58304 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.84■□□□□ 0.61
VSX2P58304 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
VSX2P58304 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.84■□□□□ 0.61
VSX2P58304 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.84■□□□□ 0.61
VSX2P58304 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VSX2P58304 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.84■□□□□ 0.61
VSX2P58304 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSX2P58304 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.84■□□□□ 0.61
VSX2P58304 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
VSX2P58304 AP006587.1-201ENST00000534129 1502 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms