Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
WNT3P56703 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.65■□□□□ 0.58
WNT3P56703 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.65■□□□□ 0.58
WNT3P56703 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
WNT3P56703 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
WNT3P56703 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.65■□□□□ 0.58
WNT3P56703 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3P56703 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
WNT3P56703 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
WNT3P56703 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
WNT3P56703 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
WNT3P56703 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
WNT3P56703 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3P56703 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
WNT3P56703 LSM12P1-201ENST00000411836 588 ntBASIC18.64■□□□□ 0.57
WNT3P56703 BX276092.2-201ENST00000417668 665 ntBASIC18.64■□□□□ 0.57
WNT3P56703 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.64■□□□□ 0.57
WNT3P56703 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3P56703 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3P56703 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3P56703 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3P56703 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3P56703 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
WNT3P56703 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3P56703 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
WNT3P56703 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.64■□□□□ 0.57
WNT3P56703 AL032819.2-201ENST00000624543 2162 ntBASIC18.64■□□□□ 0.57
WNT3P56703 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
WNT3P56703 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
WNT3P56703 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
WNT3P56703 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
WNT3P56703 AC133041.1-202ENST00000642053 222 ntBASIC18.63■□□□□ 0.57
WNT3P56703 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
WNT3P56703 AL020996.1-203ENST00000536896 2307 ntBASIC18.63■□□□□ 0.57
WNT3P56703 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3P56703 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
WNT3P56703 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3P56703 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.62■□□□□ 0.57
WNT3P56703 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.62■□□□□ 0.57
WNT3P56703 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.62■□□□□ 0.57
WNT3P56703 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.62■□□□□ 0.57
WNT3P56703 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
WNT3P56703 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3P56703 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3P56703 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3P56703 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3P56703 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
WNT3P56703 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
WNT3P56703 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3P56703 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 TNXA-203ENST00000507684 2038 ntBASIC18.61■□□□□ 0.57
WNT3P56703 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
WNT3P56703 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.61■□□□□ 0.57
WNT3P56703 AC018553.1-201ENST00000616682 1458 ntBASIC18.61■□□□□ 0.57
WNT3P56703 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
WNT3P56703 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.61■□□□□ 0.57
WNT3P56703 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
WNT3P56703 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
WNT3P56703 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms