Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PMS2P54278 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.32■□□□□ 0.84
PMS2P54278 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.32■□□□□ 0.84
PMS2P54278 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.32■□□□□ 0.84
PMS2P54278 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.32■□□□□ 0.84
PMS2P54278 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
PMS2P54278 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PMS2P54278 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PMS2P54278 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PMS2P54278 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.31■□□□□ 0.84
PMS2P54278 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PMS2P54278 AC006970.2-201ENST00000450065 779 ntBASIC20.31■□□□□ 0.84
PMS2P54278 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.31■□□□□ 0.84
PMS2P54278 KRT18P20-201ENST00000548986 1279 ntBASIC20.31■□□□□ 0.84
PMS2P54278 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.31■□□□□ 0.84
PMS2P54278 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.31■□□□□ 0.84
PMS2P54278 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.31■□□□□ 0.84
PMS2P54278 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS2P54278 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
PMS2P54278 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PMS2P54278 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS2P54278 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PMS2P54278 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS2P54278 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS2P54278 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS2P54278 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS2P54278 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS2P54278 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.3■□□□□ 0.84
PMS2P54278 AC104771.1-201ENST00000603335 964 ntBASIC20.3■□□□□ 0.84
PMS2P54278 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS2P54278 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.3■□□□□ 0.84
PMS2P54278 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS2P54278 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.3■□□□□ 0.84
PMS2P54278 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS2P54278 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PMS2P54278 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS2P54278 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS2P54278 KRT18P11-201ENST00000435214 1283 ntBASIC20.29■□□□□ 0.84
PMS2P54278 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS2P54278 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS2P54278 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS2P54278 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.29■□□□□ 0.84
PMS2P54278 AL356652.1-201ENST00000615962 565 ntBASIC20.29■□□□□ 0.84
PMS2P54278 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PMS2P54278 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
PMS2P54278 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.29■□□□□ 0.84
PMS2P54278 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.29■□□□□ 0.84
PMS2P54278 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PMS2P54278 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PMS2P54278 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS2P54278 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PMS2P54278 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS2P54278 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PMS2P54278 PGM5P4-201ENST00000421970 445 ntBASIC20.28■□□□□ 0.84
PMS2P54278 CDV3P1-201ENST00000471403 739 ntBASIC20.28■□□□□ 0.84
PMS2P54278 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms