Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.43■□□□□ 0.54
SMSP52788 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SMSP52788 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.43■□□□□ 0.54
SMSP52788 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.43■□□□□ 0.54
SMSP52788 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.43■□□□□ 0.54
SMSP52788 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMSP52788 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMSP52788 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMSP52788 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMSP52788 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.43■□□□□ 0.54
SMSP52788 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMSP52788 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
SMSP52788 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMSP52788 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SMSP52788 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMSP52788 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMSP52788 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SMSP52788 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SMSP52788 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMSP52788 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMSP52788 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SMSP52788 RPPH1-201ENST00000516869 333 ntBASIC18.42■□□□□ 0.54
SMSP52788 C1QBPP2-201ENST00000528754 825 ntBASIC18.42■□□□□ 0.54
SMSP52788 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.42■□□□□ 0.54
SMSP52788 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
SMSP52788 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMSP52788 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.42■□□□□ 0.54
SMSP52788 AC092368.3-202ENST00000574180 1591 ntBASIC18.42■□□□□ 0.54
SMSP52788 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMSP52788 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.42■□□□□ 0.54
SMSP52788 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMSP52788 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
SMSP52788 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMSP52788 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.41■□□□□ 0.54
SMSP52788 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMSP52788 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMSP52788 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 PNMA6B-201ENST00000538162 1200 ntBASIC18.41■□□□□ 0.54
SMSP52788 AC008403.3-201ENST00000598924 454 ntBASIC18.41■□□□□ 0.54
SMSP52788 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMSP52788 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMSP52788 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMSP52788 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.41■□□□□ 0.54
SMSP52788 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SMSP52788 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.4■□□□□ 0.54
SMSP52788 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.4■□□□□ 0.54
SMSP52788 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.4■□□□□ 0.54
SMSP52788 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.4■□□□□ 0.54
SMSP52788 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.4■□□□□ 0.54
SMSP52788 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SMSP52788 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SMSP52788 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.4■□□□□ 0.54
SMSP52788 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMSP52788 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMSP52788 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMSP52788 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SMSP52788 AC116562.4-201ENST00000641316 2276 ntBASIC18.39■□□□□ 0.54
SMSP52788 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.39■□□□□ 0.53
SMSP52788 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMSP52788 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SMSP52788 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.39■□□□□ 0.53
SMSP52788 KRT18P68-201ENST00000392293 1000 ntBASIC18.39■□□□□ 0.53
SMSP52788 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.39■□□□□ 0.53
SMSP52788 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SMSP52788 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SMSP52788 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMSP52788 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SMSP52788 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms