Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PHGDH-210ENST00000641115 1638 ntBASIC18.85■□□□□ 0.61
POLR2JP52435 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2JP52435 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR2JP52435 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.84■□□□□ 0.61
POLR2JP52435 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR2JP52435 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
POLR2JP52435 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR2JP52435 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR2JP52435 AIRN-201ENST00000601203 4374 ntBASIC18.84■□□□□ 0.61
POLR2JP52435 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2JP52435 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.84■□□□□ 0.61
POLR2JP52435 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR2JP52435 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
POLR2JP52435 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.83■□□□□ 0.61
POLR2JP52435 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
POLR2JP52435 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR2JP52435 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.83■□□□□ 0.61
POLR2JP52435 LINC01465-201ENST00000408887 1940 ntBASIC18.83■□□□□ 0.6
POLR2JP52435 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
POLR2JP52435 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
POLR2JP52435 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
POLR2JP52435 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR2JP52435 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2JP52435 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
POLR2JP52435 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
POLR2JP52435 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
POLR2JP52435 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.82■□□□□ 0.6
POLR2JP52435 AC034268.1-201ENST00000441047 882 ntBASIC18.82■□□□□ 0.6
POLR2JP52435 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
POLR2JP52435 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR2JP52435 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
POLR2JP52435 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLR2JP52435 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLR2JP52435 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR2JP52435 AC068338.2-201ENST00000563278 1430 ntBASIC18.82■□□□□ 0.6
POLR2JP52435 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2JP52435 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR2JP52435 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR2JP52435 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR2JP52435 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR2JP52435 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
POLR2JP52435 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.81■□□□□ 0.6
POLR2JP52435 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR2JP52435 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR2JP52435 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
POLR2JP52435 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2JP52435 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
POLR2JP52435 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2JP52435 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
POLR2JP52435 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms