Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RANBP2P49792 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RANBP2P49792 KRT18P1-202ENST00000452408 1331 ntBASIC21.4■■□□□ 1.02
RANBP2P49792 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.4■■□□□ 1.02
RANBP2P49792 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RANBP2P49792 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.4■■□□□ 1.02
RANBP2P49792 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RANBP2P49792 AL662844.1-201ENST00000546340 181 ntBASIC21.4■■□□□ 1.02
RANBP2P49792 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.4■■□□□ 1.02
RANBP2P49792 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RANBP2P49792 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.39■■□□□ 1.02
RANBP2P49792 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RANBP2P49792 AP002383.4-201ENST00000442518 975 ntBASIC21.39■■□□□ 1.02
RANBP2P49792 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.39■■□□□ 1.02
RANBP2P49792 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RANBP2P49792 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.39■■□□□ 1.01
RANBP2P49792 AC004870.1-201ENST00000315132 882 ntBASIC21.39■■□□□ 1.01
RANBP2P49792 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.39■■□□□ 1.01
RANBP2P49792 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.39■■□□□ 1.01
RANBP2P49792 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RANBP2P49792 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RANBP2P49792 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RANBP2P49792 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 AC092329.2-201ENST00000598402 547 ntBASIC21.38■■□□□ 1.01
RANBP2P49792 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 AC011484.1-201ENST00000377652 1995 ntBASIC21.38■■□□□ 1.01
RANBP2P49792 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 FAM220CP-201ENST00000395253 831 ntBASIC21.38■■□□□ 1.01
RANBP2P49792 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.38■■□□□ 1.01
RANBP2P49792 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RANBP2P49792 BX640515.1-201ENST00000617215 977 ntBASIC21.38■■□□□ 1.01
RANBP2P49792 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.38■■□□□ 1.01
RANBP2P49792 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.38■■□□□ 1.01
RANBP2P49792 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RANBP2P49792 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 AP000523.1-201ENST00000398242 1049 ntBASIC21.38■■□□□ 1.01
RANBP2P49792 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.38■■□□□ 1.01
RANBP2P49792 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RANBP2P49792 KRT8P36-201ENST00000489121 1440 ntBASIC21.38■■□□□ 1.01
RANBP2P49792 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 MIR574-201ENST00000385209 96 ntBASIC21.37■■□□□ 1.01
RANBP2P49792 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.37■■□□□ 1.01
RANBP2P49792 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.37■■□□□ 1.01
RANBP2P49792 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.37■■□□□ 1.01
RANBP2P49792 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.37■■□□□ 1.01
RANBP2P49792 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RANBP2P49792 AC140113.3-201ENST00000605663 199 ntBASIC21.37■■□□□ 1.01
RANBP2P49792 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.37■■□□□ 1.01
RANBP2P49792 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 AL121603.2-201ENST00000557373 2117 ntBASIC21.37■■□□□ 1.01
RANBP2P49792 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RANBP2P49792 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RANBP2P49792 ZNF444P1-201ENST00000559497 298 ntBASIC21.36■■□□□ 1.01
RANBP2P49792 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.36■■□□□ 1.01
RANBP2P49792 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RANBP2P49792 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.36■■□□□ 1.01
RANBP2P49792 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 GCSHP2-201ENST00000560971 527 ntBASIC21.36■■□□□ 1.01
RANBP2P49792 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RANBP2P49792 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RANBP2P49792 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RANBP2P49792 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RANBP2P49792 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RANBP2P49792 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.35■■□□□ 1.01
RANBP2P49792 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.35■■□□□ 1.01
RANBP2P49792 AC120114.3-201ENST00000611923 658 ntBASIC21.35■■□□□ 1.01
RANBP2P49792 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RANBP2P49792 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
RANBP2P49792 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RANBP2P49792 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RANBP2P49792 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RANBP2P49792 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RANBP2P49792 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.35■■□□□ 1.01
RANBP2P49792 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RANBP2P49792 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RANBP2P49792 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RANBP2P49792 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RANBP2P49792 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms