Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.64■□□□□ 0.57
CDKN2CP42773 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDKN2CP42773 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDKN2CP42773 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2CP42773 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CDKN2CP42773 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2CP42773 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDKN2CP42773 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.63■□□□□ 0.57
CDKN2CP42773 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKN2CP42773 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKN2CP42773 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKN2CP42773 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKN2CP42773 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDKN2CP42773 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKN2CP42773 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 AC004911.1-201ENST00000416316 871 ntBASIC18.62■□□□□ 0.57
CDKN2CP42773 AC023632.3-201ENST00000521633 145 ntBASIC18.62■□□□□ 0.57
CDKN2CP42773 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKN2CP42773 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.62■□□□□ 0.57
CDKN2CP42773 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKN2CP42773 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKN2CP42773 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKN2CP42773 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CDKN2CP42773 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKN2CP42773 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKN2CP42773 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKN2CP42773 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2CP42773 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKN2CP42773 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2CP42773 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2CP42773 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CDKN2CP42773 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.61■□□□□ 0.57
CDKN2CP42773 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.61■□□□□ 0.57
CDKN2CP42773 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2CP42773 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
CDKN2CP42773 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2CP42773 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDKN2CP42773 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDKN2CP42773 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKN2CP42773 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 AC005181.1-201ENST00000604782 1256 ntBASIC18.6■□□□□ 0.57
CDKN2CP42773 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDKN2CP42773 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDKN2CP42773 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2CP42773 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2CP42773 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2CP42773 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKN2CP42773 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKN2CP42773 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDKN2CP42773 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CDKN2CP42773 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKN2CP42773 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.59■□□□□ 0.57
CDKN2CP42773 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2CP42773 AL512625.2-201ENST00000417533 625 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms