Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PLK5-205ENST00000642079 1969 ntBASIC24.4■■□□□ 1.5
PDE6BP35913 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PDE6BP35913 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.4■■□□□ 1.5
PDE6BP35913 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.4■■□□□ 1.5
PDE6BP35913 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.4■■□□□ 1.5
PDE6BP35913 TSPY17P-201ENST00000450329 467 ntBASIC24.4■■□□□ 1.5
PDE6BP35913 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PDE6BP35913 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.4■■□□□ 1.5
PDE6BP35913 AL512604.3-201ENST00000569583 964 ntBASIC24.4■■□□□ 1.5
PDE6BP35913 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.4■■□□□ 1.5
PDE6BP35913 AL023803.3-201ENST00000615559 522 ntBASIC24.4■■□□□ 1.5
PDE6BP35913 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
PDE6BP35913 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.4■■□□□ 1.5
PDE6BP35913 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PDE6BP35913 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PDE6BP35913 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PDE6BP35913 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PDE6BP35913 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PDE6BP35913 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDE6BP35913 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.39■■□□□ 1.49
PDE6BP35913 TPM4P1-201ENST00000436100 807 ntBASIC24.39■■□□□ 1.49
PDE6BP35913 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.39■■□□□ 1.49
PDE6BP35913 HOMER2P1-201ENST00000455653 964 ntBASIC24.39■■□□□ 1.49
PDE6BP35913 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.39■■□□□ 1.49
PDE6BP35913 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.39■■□□□ 1.49
PDE6BP35913 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDE6BP35913 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PDE6BP35913 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDE6BP35913 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.39■■□□□ 1.49
PDE6BP35913 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
PDE6BP35913 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.39■■□□□ 1.49
PDE6BP35913 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDE6BP35913 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
PDE6BP35913 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.39■■□□□ 1.49
PDE6BP35913 PHGDH-210ENST00000641115 1638 ntBASIC24.39■■□□□ 1.49
PDE6BP35913 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDE6BP35913 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDE6BP35913 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PDE6BP35913 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE6BP35913 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE6BP35913 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.38■■□□□ 1.49
PDE6BP35913 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PDE6BP35913 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.38■■□□□ 1.49
PDE6BP35913 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.38■■□□□ 1.49
PDE6BP35913 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.38■■□□□ 1.49
PDE6BP35913 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.38■■□□□ 1.49
PDE6BP35913 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.38■■□□□ 1.49
PDE6BP35913 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.38■■□□□ 1.49
PDE6BP35913 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.38■■□□□ 1.49
PDE6BP35913 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE6BP35913 IER3-202ENST00000376377 1350 ntBASIC24.38■■□□□ 1.49
PDE6BP35913 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDE6BP35913 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDE6BP35913 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDE6BP35913 FBXW4P1-201ENST00000426721 2239 ntBASIC24.37■■□□□ 1.49
PDE6BP35913 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.37■■□□□ 1.49
PDE6BP35913 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.37■■□□□ 1.49
PDE6BP35913 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDE6BP35913 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.37■■□□□ 1.49
PDE6BP35913 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.37■■□□□ 1.49
PDE6BP35913 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.37■■□□□ 1.49
PDE6BP35913 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.37■■□□□ 1.49
PDE6BP35913 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.37■■□□□ 1.49
PDE6BP35913 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDE6BP35913 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.37■■□□□ 1.49
PDE6BP35913 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.37■■□□□ 1.49
PDE6BP35913 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.36■■□□□ 1.49
PDE6BP35913 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.36■■□□□ 1.49
PDE6BP35913 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PDE6BP35913 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.36■■□□□ 1.49
PDE6BP35913 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.36■■□□□ 1.49
PDE6BP35913 AL353719.1-201ENST00000566847 864 ntBASIC24.36■■□□□ 1.49
PDE6BP35913 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.36■■□□□ 1.49
PDE6BP35913 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDE6BP35913 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.35■■□□□ 1.49
PDE6BP35913 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 FP700111.2-201ENST00000619190 1892 ntBASIC24.35■■□□□ 1.49
PDE6BP35913 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms